Ancient DNA study reveals HLA susceptibility locus for leprosy in medieval Europeans

Open access Ancient DNA study reveals HLA susceptibility locus for leprosy in medieval Europeans, by Krause-Kyora et al., Nature Communications (2018)

Abstract:

Leprosy, a chronic infectious disease caused by Mycobacterium leprae (M. leprae), was very common in Europe till the 16th century. Here, we perform an ancient DNA study on medieval skeletons from Denmark that show lesions specific for lepromatous leprosy (LL). First, we test the remains for M. leprae DNA to confirm the infection status of the individuals and to assess the bacterial diversity. We assemble 10 complete M. leprae genomes that all differ from each other. Second,

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Haplogroup R1b-L51 in Khvalynsk samples from the Samara region dated ca. 4250-4000 BC

A commenter in a previous post left a reference to an oral communication by Aleksander Khokhlov – shared in a Russian forum on genetics – , from the XIV Conference on Samaran Archaeology, 27-28^th January 2018 (still publicized in the Samaran Archaeological Society).

NOTE. You may know Khokhlov as a palaeoanthropologist, part of the Samara Valley project, like David W. Anthony. See the project referenced here, or their recently published book.

Here is my translation of the reported summary (emphasis mine):

Khokhlov, A.A. Preliminary results of anthropological and genetic studies of materials of the Volga-Ural

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Domestication spread probably via the North Pontic steppe to Khvalynsk… but not horse riding

Interesting paper Excavation at the Razdolnoe site on the Kalmius river in 2010, by N. Kotova, D. Anthony, D. Brown, S. Degermendzhy, P. Crabtree, In: Archaeology and Palaeoecology of the Ukrainian Steppe / IA NAS of Ukraine, Kyiv 2017.

Nothing new probably to those who have read Anthony (2007), but this new publication of his research on the North Pontic region seems to contradict recent papers which cast doubts on the presence of early forms of domestication in the North Pontic steppe, and would reject thus also the arrival of domestication to Khvalynsk from a southern route.… Read the rest “Domestication spread probably via the North Pontic steppe to Khvalynsk… but not horse riding”

The Lower Danube during the Eneolithic, and the potential Proto-Anatolian community

Local cultural settings and transregional phenomena: on the impact of a funerary ritual in the Lower Danube in the 4th millennium BC, by Frinculeasa & Mirea, In: Buletinul Muzeului Judetean Teleorman, Seria Arheologie, 9, 2017, p. 75-116.

Interesting excerpts (emphasis mine):

1. In the area under discussion, around 4300-4200 BC – a chronological segment marking the evolutionary peak of ‘Old Europe’ (Anthony 2007: 225), represented by the Cucuteni A/ Tripolie BI, Aldeni-Bolgrad, Gumelniţa-Karanovo VI cultures – the first tumular burials appeared (Govedarica 2016: 85). However, flat burials, marked by the existence of some allogeneous elements in the local

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Population size potentially affecting rates of language change

Open access Population Size and the Rate of Language Evolution: A Test Across Indo-European, Austronesian, and Bantu Languages, by Greenhill et al. Front. Psychol (2018) 9:576.

Summary (emphasis mine):

What role does speaker population size play in shaping rates of language evolution? There has been little consensus on the expected relationship between rates and patterns of language change and speaker population size, with some predicting faster rates of change in smaller populations, and others expecting greater change in larger populations. The growth of comparative databases has allowed population size effects to be investigated across a wide range of language

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Rakhigarhi samples from the Indus Valley Civilisation will support the conclusions of Narasimhan et al. (2018)

New article on The Caravan, Indus Valley People Did Not Have Genetic Contribution From The Steppes: Head Of Ancient DNA Lab Testing Rakhigarhi Samples, by Hartosh Singh Val.

Niraj Rai, head of the DNA Laboratory where the samples from the Harappan site of Rakhigarhi in Haryana are being analysed, has this to say:

It will show that there is no steppe contribution to the Indus Valley DNA.

The Indus Valley people were indigenous, but in the sense that their DNA had contributions from near eastern Iranian farmers mixed with the Indian hunter-gatherer DNA, that is still reflected in the

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Fast life history as adaptive regional response to less hospitable and unstable Early Indo-Iranian territory

Another interesting paper, Life in the fast lane: Settled pastoralism in the Central Eurasian Steppe during the Middle Bronze Age, by Judd et al. (2017).

Abstract (emphasis mine):

We tested the hypothesis that the purported unstable climate in the South Urals region during the Middle Bronze Age (MBA) resulted in health instability and social stress as evidenced by skeletal response.The skeletal sample (n = 99) derived from Kamennyi Ambar 5 (KA-5), a MBA kurgan cemetery (2040-1730 cal. BCE, 2 sigma) associated with the Sintashta culture. Skeletal stress indicators assessed included cribra orbitalia, porotic hyperostosis, dental enamel hypoplasia, and tibia

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On Proto-Finnic language guesstimates, and its western homeland

Recent chapter The Indo-Europeans and the Non-Indo-Europeans in Prehistoric Northern Europe, by Petri Kallio, In: Language and Prehistory of the Indo- European Peoples: A Cross-Disciplinary Perspective, Copenhagen (2017).

Interesting excerpts (emphasis mine), especially when read in combination with the most recent papers on Early Indo-Iranian, Corded Ware, and Fennoscandian genomes:

Like the Indo-Europeanists, also the Uralicists suffer from their “school who wants it large and wants it early”. This time, however, the desired homeland is even larger and earlier, covering the whole northern half of Europe already at the end of the

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An accident at work? Traumatic lesions in the skeleton of a Yamna “wagon driver”

Interesting article posted now free at ResearchGate:

An accident at work? Traumatic lesions in the skeleton of a 4th millennium BCE “wagon driver” from Sharakhalsun, Russia, by Tucker et al. HOMO – Journal of Comparative Human Biology (2017).

Excerpts (emphasis mine):

The cemetery site of Sharakhalsun 2 is located approximately 160 km east of Stavropol in the north Caucasus region of Russia [see featured image]. It comprises a linear alignment of mounds situated on the right side of the river Kalaus near the Manych water reserve. This area was a focus of burial activity from the late 5th

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