IBD sharing between Corded Ware and Yamnaya-related populations

yamnaya-corded-ware

Oral communication Ancient DNA and the New Science of the Human Past by David Reich (March 3, 2021).

I noticed this interesting slide called “Caught red-handed”, approximately at 45m 17s, where David Reich asserts that sampled Corded Ware populations had many “close cousins” with Yamnaya-related populations “within generations”. The method could also be used, always according to Reich, to identify “who the Yamnaya mixed with to form groups like Corded Ware”.

NOTE. Notice also the the number of new sampled individuals from Khvalynsk, Ekaterinovka, and new Yamnaya groups from Chelyabinsk, Urals, Volga, Don, Moldova, and Romania.

This represents the … Read the rest “IBD sharing between Corded Ware and Yamnaya-related populations”

Proto-Indo-European Self-Study Course Book

indo-european-self-learning-course

Today is International Mother Language Day, a day as good as any other to start or continue learning Proto-Indo-European.

Fernando López-Menchero has just published the 3rd version of his Proto-Indo-European self-study book, A Practical Guidebook for Modern Indo-European Explorers, updating the previously published 1st version (2018). It includes:

  • Multiple corrections to the already published lessons 1-30, based on many comments from readers, received by email and through the Modern Indo-European Group.
  • The addition of previously announced Part II of the Guidebook, now published as lessons 31-42 and Appendices.
  • Corrections and updates to the supplementary materials,
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Germanic runes in the Prague-Type Pottery culture

slavic-prague-type-pottery-culture

Recent paper (behind paywall) Runes from Lány (Czech Republic) – The oldest inscription among Slavs. A new standard for multidisciplinary analysis of runic bones by Macháček et al. J. Archaeol Sci (2021).

Interesting excerpts (emphasis mine):

To date no archaeological find is generally accepted as evidence for a direct contact between Germanic tribes and Early Slavs in Central Europe (Brather, 2004). Here we report a novel archaeological find in support of a direct contact: a rune-inscribed fragment of a bone from the late 6th century found in a Slavic settlement. Runes are an alphabetic script, called fuþark,

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The importance of archaeology before population genomics

early-mesolithic-scandinavia

Recent paper First encounters in the north: cultural diversity and gene flow in Early Mesolithic Scandinavia, by Manninen et al. Antiquity (2021).

The authors criticize the model laid out in Günther et al. (2018), whereby the origin of the previously defined Mesolithic Scandinavian hunter-gatherer genetic group (SHG) was defined as an admixture between genetically defined WHG and EHG populations that migrated into Scandinavia from two separate Ice Age refugia: the south (WHG) and north (EHG). This dualistic model was further associated with two specific lithic blade technologies present in Early Mesolithic Scandinavia (Sørensen et al. 2013), as summarized … Read the rest “The importance of archaeology before population genomics”

R1b in Eastern Arabia Late Neolithic / Bronze Age

ras-al-hamra-221-portada

A reader asked my opinion about my reported R1b subclade of one low quality sample from Ra’s Al-Ḥamrāʾ 5 necropolis, Muscat (Oman), published (without Y-DNA) in Harney et al. (2020). For those interested, here are the relevant calls, with information on the graves taken from Salvatori (2007):

I11919_I11920_I11921: Grave 221 (ca. 3700-3200 BC), mtDNA H2a2a1, Y-DNA R1bL754 (xPH155; xL389P297M269; xPF6323PF6292).
* The samples show a straightforward path (but full of deamination question marks): CT (with 1 ancestral call M5813 1x C-A) -PP295M45P284P226 -KM526YSC0000186 Read the rest “R1b in Eastern Arabia Late Neolithic / Bronze Age”

On Fatyanovo and the survival of R1a-Z93* among Mari-Permians

fatyanovo-balanovo-corded-ware

The recent preprint on ancient DNA from Veretye, Lyalovo/Volosovo and Fatyanovo from Saag et al. (2020) has been published in Science Advances Vol. 7, no. 4, eabd6535, and with it the BAM files.

Here are the Y-SNP calls from the files, following the FTDNA Haplotree standard, with Fatyanovo individuals in alphabetical order:

  • Veretye PES001 from Peschanitsa (ca. 10785–10626 calBC), mtDNA U4a1, Y-DNA R1aM459YP1301(pre-YP1272?), with 2 SNPs derived – YP1306 (T-C, 5 reads) and Y12474 (T-A, 6 reads) – and 46 SNPs ancestral at the YP1272 level. A sample with 5× coverage that
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Recent Yamnaya-related intrusion in a Denmark Late Neolithic burial

denmark-single-grave-gjerrild

Open access Genomic Steppe ancestry in skeletons from the Neolithic Single Grave Culture in Denmark, by Egfjord et al. PLoS One (2021).

Relevant excerpts (emphasis mine, content under CC-BY):

Gjerrild stone cist

The Gjerrild stone cist in northern Djursland, eastern Jutland, is remarkable for containing the largest and best-preserved assemblage of SGC skeletons known from Denmark. From this follows a unique opportunity to obtain information on the genetic ancestry of people representing the SGC in Denmark. In the cultural history of Neolithic Denmark, northern Djursland is peculiar as this area lacks finds from the final TRB period but

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Earliest (and basal) haplogroup N-L1026, from East Siberia

baikal-siberia-basal-n-l1026

This is an update to the data from Human population dynamics and Yersinia pestis in ancient northeast Asia, by Kılınç et al. Science Advances (2021).

Files have been released, and some of them are huge, so it might take me some time to analyze them all and include specific subclades in the Ancient DNA Dataset.

For the moment, the sample I highlighted in the previous post, kra001 (2336-2135 calBCE), mtDNA C4b1, from burial Nº1 of Nefteprovod-2, is of very good quality, and it would not be surprising if it made its way to YFull’s tree. It can be … Read the rest “Earliest (and basal) haplogroup N-L1026, from East Siberia”

Haplogroup N-L708 & Q-L53 hotspot, around Lake Baikal

lake-baikal-ancient-dna

New open access paper Human population dynamics and Yersinia pestis in ancient northeast Asia, by Kılınç et al. Science Advances (2021).

Content under CC-BY-NC license. Interesting excerpts (emphasis mine):

We produced whole-genome sequence data from 40 ancient individuals spanning from the Late Upper Paleolithic to the Medieval era and representing five distinct administrative regions in the Russian Federation encompassing Yakutia, Trans-Baikal, Cis-Baikal, Krasnoyarsk Krai, and Amur Oblast (…) All individuals were accredited to either Y macro-haplogroup Q or N and non-African mitochondrial macrohaplogroups of M, N, and R.

Population dynamics during and after the LGM in northeast Asia

We

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