Palaeogenomic and biostatistical analysis of ancient DNA data from Mesolithic and Neolithic skeletal remains

lepenski-vir-mesolithic-anatolia-neolithic

PhD Thesis Palaeogenomic and biostatistical analysis of ancient DNA data from Mesolithic and Neolithic skeletal remains, by Zuzana Hofmanova (2017) at the University of Mainz.
Abstract:

Palaeogenomic data have illuminated several important periods of human past with surprising im- plications for our understanding of human evolution. One of the major changes in human prehistory was Neolithisation, the introduction of the farming lifestyle to human societies. Farming originated in the Fertile Crescent approximately 10,000 years BC and in Europe it was associated with a major population turnover. Ancient DNA from Anatolia, the presumed source area of the demic spread to

… Read the rest

Another hint at the role of Corded Ware peoples in spreading Uralic languages into north-eastern Europe, found in mtDNA analysis of the Finnish population

Open article at Scientific Reports (Nature): Identification and analysis of mtDNA genomes attributed to Finns reveal long-stagnant demographic trends obscured in the total diversity, by Översti et al. (2017).

Of special interest is its depiction of Finland’s past as including the expansion of Corded Ware population of mtDNA U5b1b2 (and probably Y-DNA R1a-M417 subclades), most likely Uralic speakers of the Forest Zone, to the north of the Yamna culture (where Late Proto-Indo-European was spoken).

A later expansion of other subclades – particularly Y-DNA N1c -, was probably associated with the later western expansion of the Eurasian Seima-Turbino phenomenon… Read the rest “Another hint at the role of Corded Ware peoples in spreading Uralic languages into north-eastern Europe, found in mtDNA analysis of the Finnish population”

Preprint paper: Estimating genetic kin relationships in prehistoric populations, by Monroy Kuhn, Jakobsson, and Günther

A new preprint paper appeared some days ago in BioRxiv, Estimating genetic kin relationships in prehistoric populations, by researchers of the Uppsala University Jose Manuel Monroy Kuhn, Mattias Jakobsson, and Torsten Günther. Jakobsson and Günther. You might remember the last two from their work Ancient X chromosomes reveal contrasting sex bias in Neolithic and Bronze Age Eurasian migrations, whose results were said not to be replicable by Lazaridis and Reich (PNAS), something they denied pointing to the limitations of the current aDNA data (PNAS).

They propose a new, more conservative method to infer close … Read the rest “Preprint paper: Estimating genetic kin relationships in prehistoric populations, by Monroy Kuhn, Jakobsson, and Günther”

Heyd, Mallory, and Prescott were right about Bell Beakers

Sometimes it is fun to read certain “old” papers. I have recently re-read some important papers that predicted what we are seeing now in aDNA analysis with surprising accuracy:

– Harrison & Heyd (2007): “We predict that future stable isotope and ancientDNA analyses of Beaker skeletal material will support our view that immigration played an important role in the Europe-wide Bell Beaker phenomenon”. – Duh, obvious, right? Wrong. Read the whole paper. It was already becoming a classic in the study of the Bell Beaker culture before the latest research on Bell Beaker aDNA, and it will be … Read the rest “Heyd, Mallory, and Prescott were right about Bell Beakers”

Indo-European demic diffusion model, 2nd edition, revised and updated

It has been three months since I published the first paper on the Indo-European demic diffusion model.

In the meantime, important pre-print papers with samples of Bell Beaker and South-Eastern European cultures compel me to add new data in support of the model. I have taken this opportunity to revise the whole text in a new paper, Indo-European demic diffusion model, 2nd edition, and also some of the maps of Indo-European migrations, which are now hosted in this blog.

I have made changes to some of the old blogs I had, like this one, … Read the rest “Indo-European demic diffusion model, 2nd edition, revised and updated”

Indo-European Demic Diffusion – The expansion of Proto-Indo-Europeans potentially explained as the expansion of R1b subclades

I published an essay (or “dissertation”) some weeks ago, about what seems to me one of the most likely models of expansion of Indo-European-speaking peoples, based on Y-DNA haplogroups. Recently J.P. Mallory had proposed* (although he was not the first) that North-West Indo-European (the ancestor of Italo-Celtic and Germanic, and Balto-Slavic**) expanded with the Bell Beaker culture, a hypothesis that is supported by the most recent radiocarbon data (and subsequent proposal of an eastern origin of the pre-Bell Beaker culture, linked to the Yamna expansion, by Volker and Heyd). As I outline in the paper, ancient DNA samples and … Read the rest “Indo-European Demic Diffusion – The expansion of Proto-Indo-Europeans potentially explained as the expansion of R1b subclades”