Preprint paper: Estimating genetic kin relationships in prehistoric populations, by Monroy Kuhn, Jakobsson, and Günther

A new preprint paper appeared some days ago in BioRxiv, Estimating genetic kin relationships in prehistoric populations, by researchers of the Uppsala University Jose Manuel Monroy Kuhn, Mattias Jakobsson, and Torsten Günther. Jakobsson and Günther. You might remember the last two from their work Ancient X chromosomes reveal contrasting sex bias in Neolithic and Bronze Age Eurasian migrations, whose results were said not to be replicable by Lazaridis and Reich (PNAS), something they denied pointing to the limitations of the current aDNA data (PNAS).

They propose a new, more conservative method to infer close … Read the rest “Preprint paper: Estimating genetic kin relationships in prehistoric populations, by Monroy Kuhn, Jakobsson, and Günther”

The Aryan migration debate, the Out of India models, and the modern “indigenous Indo-Aryan” sectarianism

The Proto-Indo-European Urheimat

Not long ago, the Proto-Indo-European language Urheimat problem used to be cyclic in nature: linguistic and archaeological publications appeared supporting a Copper Age migration from the steppe proposed by Marija Gimbutas, or a Neolithic expansion from Anatolia (or Armenia) proposed by Colin Renfrew, and back again.

I have always supported the simpler, more recent Chalcolithic migration of Late Indo-Europeans from the Pontic-Caspian steppe over an older Neolithic expansion from Anatolia with agriculture. The latter model implied a complex cultural diffusion over a greater span of time than is warranted by linguistic guesstimates, understood as the … Read the rest “The Aryan migration debate, the Out of India models, and the modern “indigenous Indo-Aryan” sectarianism”

On the origin of R1a and R1b subclades in Greece

An article published in PLoS ONE, Y-chromosomal analysis of Greek Cypriots reveals a primarily common pre-Ottoman paternal ancestry with Turkish Cypriots, by Alexandros Heraclides and colleagues, insists on the potential origin of R1b and R1a lineages in Greece from Indo-European migrations, albeit with strong regional (and thus most likely temporal) differences. From the article’s discussion:

Although the exact origins and migratory patterns of R1a and R1b are still under rigorous investigation, it seems that they are linked to Bronze Age migrations from the Western Eurasian Steppe and Eastern Europe into Southern (including Greece) and Western Europe[61]. Apparently, such

… Read the rest

Wiik’s theory about the spread of Uralic into east and central Europe, and the Uralic substrate in Germanic and Balto-Slavic

I recently wrote about how Wiik’s model was wrong in supporting a Mesolithic European Vasconic-Uralic harmony – genetically based on the modern distribution of R1b vs. N1c haplogroups -, and thus also the disruption of this harmony by Indo-Europeans (supposedly a population of R1a-lineages invading central Europe from a Balkan homeland).

Romanticism does this quite frequently: it makes us believe in some esoteric fantasy, like the ethnic continuity of our ancestors in the region we live (and a far, far greater original territory that has been unfairly diminished by invaders), providing us with strong links to support our artificial … Read the rest “Wiik’s theory about the spread of Uralic into east and central Europe, and the Uralic substrate in Germanic and Balto-Slavic”

Heyd, Mallory, and Prescott were right about Bell Beakers

Sometimes it is fun to read certain “old” papers. I have recently re-read some important papers that predicted what we are seeing now in aDNA analysis with surprising accuracy:

– Harrison & Heyd (2007): “We predict that future stable isotope and ancientDNA analyses of Beaker skeletal material will support our view that immigration played an important role in the Europe-wide Bell Beaker phenomenon”. – Duh, obvious, right? Wrong. Read the whole paper. It was already becoming a classic in the study of the Bell Beaker culture before the latest research on Bell Beaker aDNA, and it will be … Read the rest “Heyd, Mallory, and Prescott were right about Bell Beakers”

Academic journals can’t be trusted to tell the scientific truth

Dutch researcher Julian Kirchherr has published an interesting article in The Guardian about the reliability of academic journals, and the consequences for the academic world that orbits around them.

Science (and more specifically the scientific publication market) is in a major crisis, and journals are publishing a large amount of articles with fake results – which cannot be replicated in other experiments -, and even false data fabricated by researchers.

The interesting aspect of Mr. Kirchherr’s opinion is that, unlike many others who criticize the shortcomings of the publishing industry, he stresses the value of performance indicators – such as … Read the rest “Academic journals can’t be trusted to tell the scientific truth”

Indo-European pastoralists healthier than modern populations? Genomic health improving over time

A new paper has appeared at BioRxiv, The Genomic Health Of Ancient Hominins (2017) by Berence, Cooper and Lachance.

Important results are available at: http://popgen.gatech.edu/ancient-health/.

While the study’s many limitations are obvious to the authors, they still suggest certain interesting possibilities as the most important conclusions:

In general, Genetic risk scores (GRS) are similar to present-day individuals
Genomic health seems to be improving over time
Pastoralists could have been healthier than older and modern populations

Some details and shortcomings of the study (most stated by them, bold is from me) include:

Allele selection: only some of the known

… Read the rest

Indo-European Demic Diffusion – The expansion of Proto-Indo-Europeans potentially explained as the expansion of R1b subclades

I published an essay (or “dissertation”) some weeks ago, about what seems to me one of the most likely models of expansion of Indo-European-speaking peoples, based on Y-DNA haplogroups. Recently J.P. Mallory had proposed* (although he was not the first) that North-West Indo-European (the ancestor of Italo-Celtic and Germanic, and Balto-Slavic**) expanded with the Bell Beaker culture, a hypothesis that is supported by the most recent radiocarbon data (and subsequent proposal of an eastern origin of the pre-Bell Beaker culture, linked to the Yamna expansion, by Volker and Heyd). As I outline in the paper, ancient DNA samples and … Read the rest “Indo-European Demic Diffusion – The expansion of Proto-Indo-Europeans potentially explained as the expansion of R1b subclades”