› Miscellanea › General › Post Series: Human Ancestry
Tagged: ADMIXTOOLS, ADMIXTURE, human ancestry, human genetics, pca, population genomics, qpAdm, qpfstats, qpGraph
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- January 14, 2021 at 1:32 pm #34879
Carlos Quiles
Keymaster- Topics: 51
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These are pages and posts written as I learned and tried different methods, also testing models along the way. Many are clearly outdated and/or not updated (oldest first, most recent last):
Merge, remove, convert datasets in BED, PED-FAM, or GENO-SNP formats using PLINK and Eigensoft
ADMIXTURE – Ancestry components and R – PLINK, convertf, BED and PED files
AdmixTools: qpgraph, qp3Pop (f_3 test), qpBound, qpDstat, qpF4ratio, rollof
Series of posts:
Bell Beakers and Mycenaeans from Yamnaya; Corded Ware from the forest steppe
“Steppe ancestry” step by step (2019): Mesolithic to Early Bronze Age Eurasia
Survival of hunter-gatherer ancestry in West-Central European Neolithic
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